Package: SparseArray
Title: Efficient in-memory representation of multidimensional sparse arrays
Description: The SparseArray package defines the SparseArray virtual class
	to be extended by other S4 classes that wish to represent in-memory
	multidimensional sparse arrays. One such extension is the
	SVT_SparseArray class, also defined in the package, that provides
	an efficient representation of the nonzero multidimensional data
	via a novel layout called the "SVT layout". SVT_SparseArray objects
	mimic the behavior of ordinary matrices or arrays in R as much as
	possible. In particular, they suppport most of the "standard array
	API" defined in base R.
biocViews: Infrastructure, DataRepresentation
URL: https://bioconductor.org/packages/SparseArray
BugReports: https://github.com/Bioconductor/SparseArray/issues
Version: 1.1.2
License: Artistic-2.0
Encoding: UTF-8
Authors@R: c(
	person("Hervé", "Pagès", role=c("aut", "cre"),
		email="hpages.on.github@gmail.com"),
	person("Vince", "Carey", role="fnd",
		email="stvjc@channing.harvard.edu"),
	person("Rafael A.", "Irizarry", role="fnd",
		email="rafa@ds.harvard.edu"))
Depends: R (>= 4.3.0), methods, Matrix, BiocGenerics (>= 0.43.1),
	MatrixGenerics (>= 1.11.1), S4Vectors, S4Arrays (>= 1.1.1)
Imports: stats, matrixStats, IRanges, XVector
LinkingTo: S4Vectors, IRanges, XVector
Suggests: DelayedArray, testthat, knitr, rmarkdown, BiocStyle
VignetteBuilder: knitr
Collate: sparseMatrix-utils.R
	SparseArray-class.R
	COO_SparseArray-class.R
	SVT_SparseArray-class.R
	extract_sparse_array.R
	read_block_as_sparse.R
	SparseArray-subsetting.R
	SparseArray-subassignment.R
	SparseArray-combine.R
	SparseArray-summarization.R
	SparseArray-Ops-methods.R
	SparseArray-Math-methods.R
	SparseArray-Complex-methods.R
	SparseArray-misc-methods.R
	SparseMatrix-mult.R
	matrixStats-methods.R
	rowsum-methods.R
	randomSparseArray.R
	readSparseCSV.R
	zzz.R
